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TOP > About the Species(Nicotiana tabacum var. TN90) > genome data >Gene sequences

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SNP Detection
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Data List

All Markers Trait-Related Loci
Nicotiana tabacum

CDS Sequence

CDS ID

lcl|NW_015920910.1_cds_XP_016469963.1_62457
CDS Infomation

[gene=LOC107792281] [db_xref=GeneID:107792281] [protein=probable serine/threonine-protein kinase At1g54610 isoform X2] [protein_id=XP_016469963.1] [location=join(31659..32048,33340..33624,33782..34099,34325..34552,34778..34875,35278..35377,35459..35914,36143..36266,37852..37859)] [gbkey=CDS]
Sequence

ATGGGTTGCGTCAGCTCCAAGCAAGCCACGTCCCATTCCCCGGCCCACGATTCATCGTCG
GTGACTGTTGTAGACAATGGCGATCATTTATTGCATATAAAGGCAGCTGGGTTTGCCCCA
TTGGAGAAGATCAAAGAGGAGCCTGATAAAGAAGGGGAGGATAATTCTGTCCACCGTCGC
CGATTCTCTGGGAATTTGAGGAGAACCTCCTCCTCTTCCAAAAAAGGGGCTAATTCTGAA
AAAAGGGCTACTTTTAGCATTAAATTTGGGAGGTTAAATGAAGGTGAACATTTGGCCGCC
GGTTGGCCAGCTTGGCTTACTGCCGTTGCTGGTGAAGCCATTGAGGGATGGATGCCTCTT
CGATCAAACATGTTCCAGAAACTAGAAAAGATTGGACAAGGTACATATAGCAGTGTTTAT
CGAGCACGCGATATCGAAAGTGGTAAAATGGTCGCCCTAAAGAAGGTGCGATTTAACAAT
TTCCAACCGGATAGTGTCAGATTTATGGCACGAGAAATTGCAATTCTCCGCAAACTTGAC
CATCCAAACATCATGAAGCTGGAGGGGATAATCACTTCTCGGTTATCATGTAGCATCTAC
CTTGTATTTGAGTATATGGAACATGACCTCTCTGGATTATTATCGTGTCCTGACATCAAA
TTTACTGATTCACAGATCAAATGCTACATGCAGCAGCTACTGAGCGGACTAGAGCATTGC
CATTCACGAGGGATAATGCATCGGGATATTAAAGTTTCAAACATTTTGGTAAATAATGAA
GGAATTCTGAAAATAGCAGATTTTGGTCTTGCAAATTTCCTTAGTTCAAGGCATAAGCAA
CCGCTGACCAGTCGTGTGGTTACATTATGGTATCGACCTCCTGAACTTCTGTTGGGATCA
ACAAACTATGGGGTCTCTGTGGATTTGTGGAGTGTTGGTTGTGTTTTCGCAGAACTCTTT
TTTGGAAGGCCTCTCCTGAAAGGGAGAACCGAGGTAGAGCAACTGCACAAAATTTTCAAA
CTCTGTGGTACCCCACCTGATGATTACTGGAAAAAGTCTAAACTTCCACTTGCAACTATG
TTTAAGCCCAAGCAACCATATGAAAGTACACTTCGAGATAGATGTAAAGAATTACCAAAA
ACTGCTGTGAACCTTATTGAAACACTTCTTTCAATAGATCCTTATAAACGCGGAACTGCT
TCATCTGCTCTCAATTCTGAGTATTTCAATACAAAGCCTTATGCTTGTGACTCATCAAGC
CTGCCTAAGTACCCACCGAACAAGGAAATTGATGCAAAGTTCCGAGAAGAAGCACGAAGA
AAGAGAGCCAGTTCCAATGCACAAGCATCTGAAACTTCAAGAAAATCCCGGAAAGCTCTC
CAAGAACCAAGCAGTTTCTGCAAAGTGGTTCCATCAGAGGAAGTTGAGGCCAATGTTCAT
GGTTCTCGTAGAAACCACGGTGGTAGTGTCCATATTTCTAAAGGAAGACGAGCTACCGTC
TCACGGATATCAATGAAACCATTGTATGACACAGTGTCAGAAGCTTCTCAAATGACTGAC
GAATCTCAAGGGGACAGCACCATTCTTTCTGTACCTGTGCAAATGCCAGAATCGAGTGGT
TTTGCATGGGCCAAAAAAGGAAAGCTGGATTCTTCAACGACAAGGCTATATCCACCTGCC
AATTCAACGAGTCAAAAGTTAAGTGCCGTAGATCCTTCTGGTGTACTGCACACTGAGGAT
ACCTGGGACTCAAACATGCAGGACAATTATGAGCTTTTAAATAGGGCTCACACTTTCAAA
CATTCTATCCATAGGCAACATGGTCATCATGAACGATCAGATTCGTTTGACTCGTCTGAT
CAGGAACCATCAGTGGATTACACTGGCCAACAAGGAAGGGTTGCGTGCTCGGGGCCCTTG
TTATGTCAGTCCCAGAAGTTTGATACCAAGCAGGATAGTCAGTCTCGAAAAGCTGGTCAT
AGGTCCCGGTTTTATAGAGATTTGTAA

Peptide Sequence

PEP ID

XP_016469963.1
PEP Infomation

PREDICTED: probable serine/threonine-protein kinase At1g54610 isoform X2 [Nicotiana tabacum]
Sequence

MGCVSSKQATSHSPAHDSSSVTVVDNGDHLLHIKAAGFAPLEKIKEEPDKEGEDNSVHRR
RFSGNLRRTSSSSKKGANSEKRATFSIKFGRLNEGEHLAAGWPAWLTAVAGEAIEGWMPL
RSNMFQKLEKIGQGTYSSVYRARDIESGKMVALKKVRFNNFQPDSVRFMAREIAILRKLD
HPNIMKLEGIITSRLSCSIYLVFEYMEHDLSGLLSCPDIKFTDSQIKCYMQQLLSGLEHC
HSRGIMHRDIKVSNILVNNEGILKIADFGLANFLSSRHKQPLTSRVVTLWYRPPELLLGS
TNYGVSVDLWSVGCVFAELFFGRPLLKGRTEVEQLHKIFKLCGTPPDDYWKKSKLPLATM
FKPKQPYESTLRDRCKELPKTAVNLIETLLSIDPYKRGTASSALNSEYFNTKPYACDSSS
LPKYPPNKEIDAKFREEARRKRASSNAQASETSRKSRKALQEPSSFCKVVPSEEVEANVH
GSRRNHGGSVHISKGRRATVSRISMKPLYDTVSEASQMTDESQGDSTILSVPVQMPESSG
FAWAKKGKLDSSTTRLYPPANSTSQKLSAVDPSGVLHTEDTWDSNMQDNYELLNRAHTFK
HSIHRQHGHHERSDSFDSSDQEPSVDYTGQQGRVACSGPLLCQSQKFDTKQDSQSRKAGH
RSRFYRDL

Transcript Sequence

Gene sequence data has not been registered.